Publications

2014

Databases for lncRNAs: a comparative evaluation of emerging tools.

Fritah S, Niclou SP, Azuaje F. 2014 Nov. Rna.20(11):1655-65.

A novel multilayer immunoisolating encapsulation system overcoming protrusion of cells.

Bhujbal SV, de Haan B, Niclou SP, de Vos P. 2014 Oct. Sci Rep.4:6856.

Modeling tumor heterogeneity and predicting effective combined therapies through computational optimization algorithms.

Azuaje FJ. 2014 Oct. Proc Natl Acad Sci U S A.111(41):E4287. Epub 2014 Sep 24.

Transcriptional response to cardiac injury in the zebrafish: systematic identification of genes with highly concordant activity across in vivo models.

Rodius S, Nazarov PV, Nepomuceno-Chamorro IA, Jeanty C, Gonzalez-Rosa JM, Ibberson M, da Costa RM, Xenarios I, Mercader N, Azuaje F. 2014 Oct. BMC Genomics.15(1):852.

Multimodal imaging of gliomas in the context of evolving cellular and molecular therapies.

Keunen O, Taxt T, Gruner R, Lund-Johansen M, Tonn JC, Pavlin T, Bjerkvig R, Niclou SP, Thorsen F. 2014 Sep. Adv Drug Deliv Rev.76:98-115. Epub 2014 Jul 28.

Peptide manager: A peptide selection tool for targeted proteomic studies involving mixed samples from different species.

Demeure K, Duriez E, Domon B, Niclou SP. 2014 Sep. Front Genet.5:305.

Factors influencing the mechanical stability of alginate beads applicable for immunoisolation of mammalian cells.

Bhujbal SV, Paredes-Juarez GA, Niclou SP, de Vos P. 2014 Sep. J Mech Behav Biomed Mater.37:196-208. Epub 2014 Jun 2.

Sumoylation controls host anti-bacterial response to the gut invasive pathogen Shigella flexneri.

Fritah S, Lhocine N, Golebiowski F, Mounier J, Andrieux A, Jouvion G, Hay RT, Sansonetti P, Dejean A. 2014 Sep. EMBO Rep.15(9):965-72. Epub 2014 Aug 5.

Disruption of autophagy by the histone deacetylase inhibitor MGCD0103 and its therapeutic implication in B-Cell chronic lymphocytic leukemia.

El-Khoury V, Pierson S, Szwarcbart E, Brons NH, Roland O, Cherrier-De Wilde S, Plawny L, Van Dyck E, Berchem G. 2014 Aug. Leukemia.28(8):1636-46. Epub 2014 Jan 14.

Glutamate as chemotactic fuel for diffuse glioma cells: are they glutamate suckers?

van Lith SA, Navis AC, Verrijp K, Niclou SP, Bjerkvig R, Wesseling P, Tops B, Molenaar R, van Noorden CJ, Leenders WP. 2014 Aug. Biochim Biophys Acta-Rev Cancer 1846(1):66–74. Epub 2014 Apr 18.

Colorectal cancer derived organotypic spheroids maintain essential tissue characteristics but adapt their metabolism in culture.

Rajcevic U, Knol JC, Piersma S, Bougnaud S, Fack F, Sundlisaeter E, Sondenaa K, Myklebust R, Pham TV, Niclou SP, Jimenez CR. 2014 Jul. Proteome Sci.12:39.

Selecting biologically informative genes in co-expression networks with a centrality score.

Azuaje FJ. 2014 Jun. Biol Direct.9(1):12.

Linking biochemical pathways and networks to adverse drug reactions.

Zheng H, Wang H, Xu H, Wu Y, Zhao Z, Azuaje F. 2014 Jun. IEEE Trans Nanobioscience.13(2):131-7.

In vitro treatment of melanoma brain metastasis by simultaneously targeting the MAPK and PI3K signaling pathways.

Daphu I, Horn S, Stieber D, Varughese JK, Spriet E, Dale HA, Skaftnesmo KO, Bjerkvig R, Thorsen F. 2014 May. Int J Mol Sci.15(5):8773-94.

U-251 revisited: genetic drift and phenotypic consequences of long-term cultures of glioblastoma cells.

Torsvik A, Stieber D, Enger PØ, Golebiewska A, Molven A, Svendsen A, Westermark B, Niclou SP, Olsen TK, Chekenya Enger M, Bjerkvig R. 2014 May. Cancer Med.3(4):812-24. Epub 2014 May 8.

Bevacizumab treatment for human glioblastoma. Can it induce cognitive impairment?

Pakzad A, Obad N, Espedal H, Stieber D, Keunen O, Sakariassen PO, Niclou SP, Bjerkvig R. 2014 May. Neuro Oncol.16(5):754-6.

Identification of a novel lytic peptide for the treatment of solid tumours.

Szczepanski C, Tenstad O, Baumann A, Martinez A, Myklebust R, Bjerkvig R, Prestegarden L. 2014 May. Genes Cancer.5(5-6):186-200.

Drug and cell encapsulation: alternative delivery options for the treatment of malignant brain tumors.

Bhujbal SV, de Vos P, Niclou SP. 2014 Apr. Adv Drug Deliv Rev.67-68:142-153. Epub 2014 Jan 31.

Bronchial airway gene expression in smokers with lung or head and neck cancer.

Van Dyck E, Nazarov PV, Muller A, Nicot N, Bosseler M, Pierson S, Van Moer K, Palissot V, Mascaux C, Knolle U, Ninane V, Nati R, Bremnes RM, Vallar L, Berchem G, Schlesser M. 2014 Apr. Cancer Med.3(2):322-36. Epub 2014 Feb 4.

Glioblastomas are composed of genetically divergent clones with distinct tumourigenic potential and variable stem cell-associated phenotypes.

Stieber D, Golebiewska A, Evers L, Lenkiewicz E, Brons NH, Nicot N, Oudin A, Bougnaud S, Hertel F, Bjerkvig R, Vallar L, Barrett MT, Niclou SP. 2014 Feb. Acta Neuropathol.127(2):203-1. Epub 2013 Oct 24.

An information theoretic approach to assessing gene-ontology-driven similarity and its application.

Wang H, Azuaje F, Zheng H. 2014 Feb. Int J Data Min Bioinform.9(2):121 - 134. Epub 2012.

Meeting highlights from the 2013 European Society of Cardiology Heart Failure Association Winter Meeting on Translational Heart Failure Research.

Hohl M, Ardehali H, Azuaje FJ, Breckenridge RA, Doehner W, Eaton P, Ehret GB, Fujita T, Gaetani R, Giacca M, Hasenfuß G, Heymans S, Leite-Moreira AF, Linke WA, Linz D, Lyon A, Mamas MA, Orešič M, Papp Z, Pedrazzini T, Piepoli M, Prosser B, Rizzuto R, Tarone G, Tian R, van Craenenbroeck E, van Rooij E, Wai T, Weiss G, Maack C. 2014 Jan. Eur J Heart Fail.16(1):6-14.